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Cluster: HRGMv2_3814_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3814_15 HRGMv2_3814_15_2 561 1457 + GT111
TC HRGMv2_3814_15 HRGMv2_3814_15_3 2049 3584 + 9.B.18.1.2
STP HRGMv2_3814_15 HRGMv2_3814_15_4 3791 4993 + ATPase_2
CAZyme HRGMv2_3814_15 HRGMv2_3814_15_5 5027 7855 + CBM13 | CBM13 | CBM13 | GH25
TF HRGMv2_3814_15 HRGMv2_3814_15_6 7868 8896 - LacI
STP HRGMv2_3814_15 HRGMv2_3814_15_7 9105 10352 + SBP_bac_1
TC HRGMv2_3814_15 HRGMv2_3814_15_8 10413 12500 + 3.A.1.1.36
CAZyme HRGMv2_3814_15 HRGMv2_3814_15_9 12497 14320 + GH176
NULL(UNKNOWN) HRGMv2_3814_15 HRGMv2_3814_15_10 14567 15097 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3814_15 HRGMv2_3814_15_11 15352 17607 + Sulfatase
CAZyme HRGMv2_3814_15 HRGMv2_3814_15_12 17643 18599 - GT2
Gene ID: HRGMv2_3814_15_2
Type: CAZyme
Location: 561 - 1457 (+)
Gene ID: HRGMv2_3814_15_3
Type: TC
Location: 2049 - 3584 (+)
Gene ID: HRGMv2_3814_15_4
Type: STP
Location: 3791 - 4993 (+)
Gene ID: HRGMv2_3814_15_5
Type: CAZyme
Location: 5027 - 7855 (+)
Gene ID: HRGMv2_3814_15_6
Type: TF
Location: 7868 - 8896 (-)
Gene ID: HRGMv2_3814_15_7
Type: STP
Location: 9105 - 10352 (+)
Gene ID: HRGMv2_3814_15_8
Type: TC
Location: 10413 - 12500 (+)
Gene ID: HRGMv2_3814_15_9
Type: CAZyme
Location: 12497 - 14320 (+)
Gene ID: HRGMv2_3814_15_10
Type:
Location: 14567 - 15097 (-)
Gene ID: HRGMv2_3814_15_11
Type: pfam
Location: 15352 - 17607 (+)
Gene ID: HRGMv2_3814_15_12
Type: CAZyme
Location: 17643 - 18599 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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