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Cluster: HRGMv2_3814_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3814_4 HRGMv2_3814_4_7 5383 6189 - 3.A.2.1.1
CAZyme HRGMv2_3814_4 HRGMv2_3814_4_8 6628 7590 + GT8
CAZyme HRGMv2_3814_4 HRGMv2_3814_4_9 7640 8614 - GT8
pfam HRGMv2_3814_4 HRGMv2_3814_4_10 9593 9838 + DUF4230
TC HRGMv2_3814_4 HRGMv2_3814_4_11 10033 11475 - 2.A.1.3.22
pfam HRGMv2_3814_4 HRGMv2_3814_4_12 11486 12532 - IU_nuc_hydro
CAZyme HRGMv2_3814_4 HRGMv2_3814_4_13 12889 14064 + GT1
NULL(UNKNOWN) HRGMv2_3814_4 HRGMv2_3814_4_14 14446 14637 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3814_4 HRGMv2_3814_4_15 14888 15283 + MobC
TC HRGMv2_3814_4 HRGMv2_3814_4_16 15286 16758 + 3.A.7.19.1
Gene ID: HRGMv2_3814_4_7
Type: TC
Location: 5383 - 6189 (-)
Gene ID: HRGMv2_3814_4_8
Type: CAZyme
Location: 6628 - 7590 (+)
Gene ID: HRGMv2_3814_4_9
Type: CAZyme
Location: 7640 - 8614 (-)
Gene ID: HRGMv2_3814_4_10
Type: pfam
Location: 9593 - 9838 (+)
Gene ID: HRGMv2_3814_4_11
Type: TC
Location: 10033 - 11475 (-)
Gene ID: HRGMv2_3814_4_12
Type: pfam
Location: 11486 - 12532 (-)
Gene ID: HRGMv2_3814_4_13
Type: CAZyme
Location: 12889 - 14064 (+)
Gene ID: HRGMv2_3814_4_14
Type:
Location: 14446 - 14637 (+)
Gene ID: HRGMv2_3814_4_15
Type: pfam
Location: 14888 - 15283 (+)
Gene ID: HRGMv2_3814_4_16
Type: TC
Location: 15286 - 16758 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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