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Cluster: HRGMv2_3814_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3814_26 HRGMv2_3814_26_1 3 1943 + GH13_31
NULL(UNKNOWN) HRGMv2_3814_26 HRGMv2_3814_26_2 1998 3056 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3814_26 HRGMv2_3814_26_3 3634 4518 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3814_26 HRGMv2_3814_26_4 4759 6267 + GH13_18
NULL(UNKNOWN) HRGMv2_3814_26 HRGMv2_3814_26_5 6412 6717 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3814_26 HRGMv2_3814_26_6 6734 8056 + 2.A.1.2.93
NULL(UNKNOWN) HRGMv2_3814_26 HRGMv2_3814_26_7 8162 8707 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3814_26 HRGMv2_3814_26_8 9626 11188 + 2.A.3.1.20
pfam HRGMv2_3814_26 HRGMv2_3814_26_9 11188 11613 + RDD
TC HRGMv2_3814_26 HRGMv2_3814_26_10 11642 13108 - 2.A.3.1.3
Gene ID: HRGMv2_3814_26_1
Type: CAZyme
Location: 3 - 1943 (+)
Gene ID: HRGMv2_3814_26_2
Type:
Location: 1998 - 3056 (-)
Gene ID: HRGMv2_3814_26_3
Type:
Location: 3634 - 4518 (+)
Gene ID: HRGMv2_3814_26_4
Type: CAZyme
Location: 4759 - 6267 (+)
Gene ID: HRGMv2_3814_26_5
Type:
Location: 6412 - 6717 (+)
Gene ID: HRGMv2_3814_26_6
Type: TC
Location: 6734 - 8056 (+)
Gene ID: HRGMv2_3814_26_7
Type:
Location: 8162 - 8707 (-)
Gene ID: HRGMv2_3814_26_8
Type: TC
Location: 9626 - 11188 (+)
Gene ID: HRGMv2_3814_26_9
Type: pfam
Location: 11188 - 11613 (+)
Gene ID: HRGMv2_3814_26_10
Type: TC
Location: 11642 - 13108 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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