dbCAN Logo

Cluster: HRGMv2_3784_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3784_32 HRGMv2_3784_32_16 15967 16590 - 2.A.95.1.4
STP HRGMv2_3784_32 HRGMv2_3784_32_17 16795 18666 + Pyr_redox_2
TC HRGMv2_3784_32 HRGMv2_3784_32_18 18656 19618 + 3.A.1.5.34
NULL(UNKNOWN) HRGMv2_3784_32 HRGMv2_3784_32_19 19882 27459 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3784_32 HRGMv2_3784_32_20 27869 28783 - 0035607 | 0036286
CAZyme HRGMv2_3784_32 HRGMv2_3784_32_21 28905 30191 + GH27
CAZyme HRGMv2_3784_32 HRGMv2_3784_32_22 30352 34161 + GH167
NULL(UNKNOWN) HRGMv2_3784_32 HRGMv2_3784_32_23 34187 34975 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3784_32 HRGMv2_3784_32_24 35365 36525 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
CAZyme HRGMv2_3784_32 HRGMv2_3784_32_25 36641 37663 + GH5_13
Gene ID: HRGMv2_3784_32_16
Type: TC
Location: 15967 - 16590 (-)
Gene ID: HRGMv2_3784_32_17
Type: STP
Location: 16795 - 18666 (+)
Gene ID: HRGMv2_3784_32_18
Type: TC
Location: 18656 - 19618 (+)
Gene ID: HRGMv2_3784_32_19
Type:
Location: 19882 - 27459 (-)
Gene ID: HRGMv2_3784_32_20
Type: TF
Location: 27869 - 28783 (-)
Gene ID: HRGMv2_3784_32_21
Type: CAZyme
Location: 28905 - 30191 (+)
Gene ID: HRGMv2_3784_32_22
Type: CAZyme
Location: 30352 - 34161 (+)
Gene ID: HRGMv2_3784_32_23
Type:
Location: 34187 - 34975 (+)
Gene ID: HRGMv2_3784_32_24
Type: pfam
Location: 35365 - 36525 (+)
Gene ID: HRGMv2_3784_32_25
Type: CAZyme
Location: 36641 - 37663 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List