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Cluster: HRGMv2_3781_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3781_50 HRGMv2_3781_50_8 7640 9823 - GH36
pfam HRGMv2_3781_50 HRGMv2_3781_50_9 9910 11208 - ThiC_Rad_SAM
CAZyme HRGMv2_3781_50 HRGMv2_3781_50_10 11239 12543 - GT30
STP HRGMv2_3781_50 HRGMv2_3781_50_11 12557 14392 - SIS | SIS
pfam HRGMv2_3781_50 HRGMv2_3781_50_12 14405 14818 - Nuc_deoxyrib_tr | Nuc_deoxyri_tr2
TC HRGMv2_3781_50 HRGMv2_3781_50_13 14913 16679 - 8.A.7.1.1
STP HRGMv2_3781_50 HRGMv2_3781_50_14 16711 17004 - PTS-HPr
pfam HRGMv2_3781_50 HRGMv2_3781_50_15 17245 18522 + DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC HRGMv2_3781_50 HRGMv2_3781_50_16 18701 19771 + 3.A.1.7.1
TC HRGMv2_3781_50 HRGMv2_3781_50_17 19798 20733 + 3.A.1.7.1
TC HRGMv2_3781_50 HRGMv2_3781_50_18 20735 21610 + 3.A.1.7.1
TC HRGMv2_3781_50 HRGMv2_3781_50_19 21600 22376 + 3.A.1.7.1
pfam HRGMv2_3781_50 HRGMv2_3781_50_20 22434 23123 + PhoU | PhoU
CAZyme HRGMv2_3781_50 HRGMv2_3781_50_21 23071 26172 - GH78
Gene ID: HRGMv2_3781_50_8
Type: CAZyme
Location: 7640 - 9823 (-)
Gene ID: HRGMv2_3781_50_9
Type: pfam
Location: 9910 - 11208 (-)
Gene ID: HRGMv2_3781_50_10
Type: CAZyme
Location: 11239 - 12543 (-)
Gene ID: HRGMv2_3781_50_11
Type: STP
Location: 12557 - 14392 (-)
Gene ID: HRGMv2_3781_50_12
Type: pfam
Location: 14405 - 14818 (-)
Gene ID: HRGMv2_3781_50_13
Type: TC
Location: 14913 - 16679 (-)
Gene ID: HRGMv2_3781_50_14
Type: STP
Location: 16711 - 17004 (-)
Gene ID: HRGMv2_3781_50_15
Type: pfam
Location: 17245 - 18522 (+)
Gene ID: HRGMv2_3781_50_16
Type: TC
Location: 18701 - 19771 (+)
Gene ID: HRGMv2_3781_50_17
Type: TC
Location: 19798 - 20733 (+)
Gene ID: HRGMv2_3781_50_18
Type: TC
Location: 20735 - 21610 (+)
Gene ID: HRGMv2_3781_50_19
Type: TC
Location: 21600 - 22376 (+)
Gene ID: HRGMv2_3781_50_20
Type: pfam
Location: 22434 - 23123 (+)
Gene ID: HRGMv2_3781_50_21
Type: CAZyme
Location: 23071 - 26172 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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