Cluster: HRGMv2_3781_CGC50
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3781
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3781_48 | HRGMv2_3781_48_2 | 1514 | 3379 | - | GH39 |
| NULL(UNKNOWN) | HRGMv2_3781_48 | HRGMv2_3781_48_3 | 3404 | 4123 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3781_48 | HRGMv2_3781_48_4 | 4149 | 5342 | - | FAD_binding_2 | FAD_oxidored | FAD_oxidored | NAD_binding_8 |
| TC | HRGMv2_3781_48 | HRGMv2_3781_48_5 | 5608 | 6936 | - | 1.A.23.4.2 |
Gene ID: HRGMv2_3781_48_2
Type: CAZyme
Location: 1514 - 3379 (-)
Type: CAZyme
Location: 1514 - 3379 (-)
Gene ID: HRGMv2_3781_48_3
Type:
Location: 3404 - 4123 (-)
Type:
Location: 3404 - 4123 (-)
Gene ID: HRGMv2_3781_48_4
Type: pfam
Location: 4149 - 5342 (-)
Type: pfam
Location: 4149 - 5342 (-)
Gene ID: HRGMv2_3781_48_5
Type: TC
Location: 5608 - 6936 (-)
Type: TC
Location: 5608 - 6936 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp900550905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.