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Cluster: HRGMv2_3781_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3781_44 HRGMv2_3781_44_13 15426 17039 + GT83
CAZyme HRGMv2_3781_44 HRGMv2_3781_44_14 17036 18730 + GT83
NULL(UNKNOWN) HRGMv2_3781_44 HRGMv2_3781_44_15 18727 19308 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3781_44 HRGMv2_3781_44_16 19318 21099 - Sulfatase
CAZyme HRGMv2_3781_44 HRGMv2_3781_44_17 21330 22727 + GT2
NULL(UNKNOWN) HRGMv2_3781_44 HRGMv2_3781_44_18 22820 23224 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3781_44 HRGMv2_3781_44_19 23221 24213 - MlaD
TC HRGMv2_3781_44 HRGMv2_3781_44_20 24206 25018 - 3.A.1.27.1
TC HRGMv2_3781_44 HRGMv2_3781_44_21 25029 25820 - 3.A.1.27.1
NULL(UNKNOWN) HRGMv2_3781_44 HRGMv2_3781_44_22 25855 26652 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3781_44 HRGMv2_3781_44_23 26669 28126 - 3.A.5.1.2
Gene ID: HRGMv2_3781_44_13
Type: CAZyme
Location: 15426 - 17039 (+)
Gene ID: HRGMv2_3781_44_14
Type: CAZyme
Location: 17036 - 18730 (+)
Gene ID: HRGMv2_3781_44_15
Type:
Location: 18727 - 19308 (+)
Gene ID: HRGMv2_3781_44_16
Type: pfam
Location: 19318 - 21099 (-)
Gene ID: HRGMv2_3781_44_17
Type: CAZyme
Location: 21330 - 22727 (+)
Gene ID: HRGMv2_3781_44_18
Type:
Location: 22820 - 23224 (-)
Gene ID: HRGMv2_3781_44_19
Type: pfam
Location: 23221 - 24213 (-)
Gene ID: HRGMv2_3781_44_20
Type: TC
Location: 24206 - 25018 (-)
Gene ID: HRGMv2_3781_44_21
Type: TC
Location: 25029 - 25820 (-)
Gene ID: HRGMv2_3781_44_22
Type:
Location: 25855 - 26652 (-)
Gene ID: HRGMv2_3781_44_23
Type: TC
Location: 26669 - 28126 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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