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Cluster: HRGMv2_3781_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3781_39 HRGMv2_3781_39_18 18464 20266 - 3.A.1.106.2
CAZyme HRGMv2_3781_39 HRGMv2_3781_39_19 20704 22284 + GH78
TC HRGMv2_3781_39 HRGMv2_3781_39_20 22382 23899 + 2.A.114.1.6
pfam HRGMv2_3781_39 HRGMv2_3781_39_21 24149 25465 + AMP-binding | AMP-binding_C_2
pfam HRGMv2_3781_39 HRGMv2_3781_39_22 25577 27586 - GTP_EFTU | EFG_C | MMR_HSR1 | GTP_EFTU_D2 | EFG_IV | EFG_III | EF-G_D2
CAZyme HRGMv2_3781_39 HRGMv2_3781_39_23 27952 29058 + GH5_37
Gene ID: HRGMv2_3781_39_18
Type: TC
Location: 18464 - 20266 (-)
Gene ID: HRGMv2_3781_39_19
Type: CAZyme
Location: 20704 - 22284 (+)
Gene ID: HRGMv2_3781_39_20
Type: TC
Location: 22382 - 23899 (+)
Gene ID: HRGMv2_3781_39_21
Type: pfam
Location: 24149 - 25465 (+)
Gene ID: HRGMv2_3781_39_22
Type: pfam
Location: 25577 - 27586 (-)
Gene ID: HRGMv2_3781_39_23
Type: CAZyme
Location: 27952 - 29058 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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