Cluster: HRGMv2_3781_CGC38
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3781
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3781_32 | HRGMv2_3781_32_5 | 7092 | 9539 | + | 1.B.22.4.1 |
| NULL(UNKNOWN) | HRGMv2_3781_32 | HRGMv2_3781_32_6 | 9987 | 10715 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3781_32 | HRGMv2_3781_32_7 | 10712 | 13510 | - | GH156 |
| TF | HRGMv2_3781_32 | HRGMv2_3781_32_8 | 13507 | 14256 | - | GntR |
| TC | HRGMv2_3781_32 | HRGMv2_3781_32_9 | 14270 | 15097 | - | 3.A.1.1.36 |
| TC | HRGMv2_3781_32 | HRGMv2_3781_32_10 | 15087 | 15989 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_3781_32_5
Type: TC
Location: 7092 - 9539 (+)
Type: TC
Location: 7092 - 9539 (+)
Gene ID: HRGMv2_3781_32_6
Type:
Location: 9987 - 10715 (-)
Type:
Location: 9987 - 10715 (-)
Gene ID: HRGMv2_3781_32_7
Type: CAZyme
Location: 10712 - 13510 (-)
Type: CAZyme
Location: 10712 - 13510 (-)
Gene ID: HRGMv2_3781_32_8
Type: TF
Location: 13507 - 14256 (-)
Type: TF
Location: 13507 - 14256 (-)
Gene ID: HRGMv2_3781_32_9
Type: TC
Location: 14270 - 15097 (-)
Type: TC
Location: 14270 - 15097 (-)
Gene ID: HRGMv2_3781_32_10
Type: TC
Location: 15087 - 15989 (-)
Type: TC
Location: 15087 - 15989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp900550905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.