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Cluster: HRGMv2_3781_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3781_13 HRGMv2_3781_13_51 56734 58677 + GH5_19
pfam HRGMv2_3781_13 HRGMv2_3781_13_52 58699 59235 - Lipocalin | Lipocalin_2
NULL(UNKNOWN) HRGMv2_3781_13 HRGMv2_3781_13_53 59252 60040 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3781_13 HRGMv2_3781_13_54 60122 63367 - GH148
pfam HRGMv2_3781_13 HRGMv2_3781_13_55 63388 64131 - SBP_bac_10
CAZyme HRGMv2_3781_13 HRGMv2_3781_13_56 64121 65425 - GH28
TF HRGMv2_3781_13 HRGMv2_3781_13_57 65595 66497 + HTH_AraC | HTH_AraC
TC HRGMv2_3781_13 HRGMv2_3781_13_58 66646 67293 - 1.A.8.13.3
Gene ID: HRGMv2_3781_13_51
Type: CAZyme
Location: 56734 - 58677 (+)
Gene ID: HRGMv2_3781_13_52
Type: pfam
Location: 58699 - 59235 (-)
Gene ID: HRGMv2_3781_13_53
Type:
Location: 59252 - 60040 (-)
Gene ID: HRGMv2_3781_13_54
Type: CAZyme
Location: 60122 - 63367 (-)
Gene ID: HRGMv2_3781_13_55
Type: pfam
Location: 63388 - 64131 (-)
Gene ID: HRGMv2_3781_13_56
Type: CAZyme
Location: 64121 - 65425 (-)
Gene ID: HRGMv2_3781_13_57
Type: TF
Location: 65595 - 66497 (+)
Gene ID: HRGMv2_3781_13_58
Type: TC
Location: 66646 - 67293 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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