Cluster: HRGMv2_3781_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3781
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3781_13 | HRGMv2_3781_13_38 | 43040 | 44632 | - | 2.A.21.8.3 |
| pfam | HRGMv2_3781_13 | HRGMv2_3781_13_39 | 44847 | 45824 | + | LYTB |
| CAZyme | HRGMv2_3781_13 | HRGMv2_3781_13_40 | 45821 | 48052 | - | GH2 |
| TF | HRGMv2_3781_13 | HRGMv2_3781_13_41 | 48049 | 49053 | - | GntR |
| TC | HRGMv2_3781_13 | HRGMv2_3781_13_42 | 49314 | 50288 | + | 2.A.28.2.4 |
Gene ID: HRGMv2_3781_13_38
Type: TC
Location: 43040 - 44632 (-)
Type: TC
Location: 43040 - 44632 (-)
Gene ID: HRGMv2_3781_13_39
Type: pfam
Location: 44847 - 45824 (+)
Type: pfam
Location: 44847 - 45824 (+)
Gene ID: HRGMv2_3781_13_40
Type: CAZyme
Location: 45821 - 48052 (-)
Type: CAZyme
Location: 45821 - 48052 (-)
Gene ID: HRGMv2_3781_13_41
Type: TF
Location: 48049 - 49053 (-)
Type: TF
Location: 48049 - 49053 (-)
Gene ID: HRGMv2_3781_13_42
Type: TC
Location: 49314 - 50288 (+)
Type: TC
Location: 49314 - 50288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp900550905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.