Cluster: HRGMv2_3780_CGC22
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_3780
- CGC Family ID: CGCFAM_00494
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3780_6 | HRGMv2_3780_6_75 | 89713 | 90747 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_76 | 90773 | 91663 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3780_6 | HRGMv2_3780_6_77 | 91660 | 92853 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_78 | 92858 | 93988 | - | GT4 |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_79 | 94001 | 94723 | - | CE4 |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_80 | 94720 | 95769 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_3780_6 | HRGMv2_3780_6_81 | 95786 | 96850 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3780_6 | HRGMv2_3780_6_82 | 96860 | 98119 | - | Wzy_C |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_83 | 98116 | 99318 | - | GT4 |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_84 | 99318 | 100526 | - | GT4 |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_85 | 100855 | 101862 | - | GT2 |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_86 | 101859 | 102905 | - | GT2 |
| CAZyme | HRGMv2_3780_6 | HRGMv2_3780_6_87 | 102920 | 103981 | - | GT4 |
Gene ID: HRGMv2_3780_6_75
Type: TC
Location: 89713 - 90747 (-)
Type: TC
Location: 89713 - 90747 (-)
Gene ID: HRGMv2_3780_6_76
Type: CAZyme
Location: 90773 - 91663 (-)
Type: CAZyme
Location: 90773 - 91663 (-)
Gene ID: HRGMv2_3780_6_77
Type:
Location: 91660 - 92853 (-)
Type:
Location: 91660 - 92853 (-)
Gene ID: HRGMv2_3780_6_78
Type: CAZyme
Location: 92858 - 93988 (-)
Type: CAZyme
Location: 92858 - 93988 (-)
Gene ID: HRGMv2_3780_6_79
Type: CAZyme
Location: 94001 - 94723 (-)
Type: CAZyme
Location: 94001 - 94723 (-)
Gene ID: HRGMv2_3780_6_80
Type: CAZyme
Location: 94720 - 95769 (-)
Type: CAZyme
Location: 94720 - 95769 (-)
Gene ID: HRGMv2_3780_6_81
Type:
Location: 95786 - 96850 (-)
Type:
Location: 95786 - 96850 (-)
Gene ID: HRGMv2_3780_6_82
Type: pfam
Location: 96860 - 98119 (-)
Type: pfam
Location: 96860 - 98119 (-)
Gene ID: HRGMv2_3780_6_83
Type: CAZyme
Location: 98116 - 99318 (-)
Type: CAZyme
Location: 98116 - 99318 (-)
Gene ID: HRGMv2_3780_6_84
Type: CAZyme
Location: 99318 - 100526 (-)
Type: CAZyme
Location: 99318 - 100526 (-)
Gene ID: HRGMv2_3780_6_85
Type: CAZyme
Location: 100855 - 101862 (-)
Type: CAZyme
Location: 100855 - 101862 (-)
Gene ID: HRGMv2_3780_6_86
Type: CAZyme
Location: 101859 - 102905 (-)
Type: CAZyme
Location: 101859 - 102905 (-)
Gene ID: HRGMv2_3780_6_87
Type: CAZyme
Location: 102920 - 103981 (-)
Type: CAZyme
Location: 102920 - 103981 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp900548385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.