PROTEIN: HRGMv2_3780_6_81
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Protein File & Metadata
Source:
HRGMv2_3780_6_81.pdb
Genome ID:
Protein ID:
HRGMv2_3780_6_81
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Protein Sequence
MSLHVIRSTE ELIQLRDSWG DLYKKSSSAT VFQSYEYNLS AWNFIKIHDK AENLYIVIDK 60 DQSGALNLIL PCYIDERGYL RFINDLHTDF CDCLISDNST SIHHLMEDLF ELIQKESEIT 120 FLYFDNLRGG SPLIPYFKVF GNNTMIFSQT EHTSLHLQKE KSYPESFSHL KSKERAKLKK 180 ILRDAPPMNL KHFKSSEQVF PEEVLQQLWK EITDRGLRSR SYLNPDFFNF TRDMYQNGLL 240 EIILLHDPET DNPAAAAYFY VSSEQNFWMQ WVILCADKRL NLPLDILCCN EFSKVNEGIL 300 DFGRGGYFYK VHNFKPEIKP LYRLLLSKNL RGNLYILYRV MIAHLRKTYN KYHE 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HZ10-F1-model_v4 | 2 | 347 | 1 | 358 | 0.7448 |
0.8024 |
| AF-A0A1D6J7B6-F1-model_v4 | 9 | 347 | 1 | 367 | 0.7242 |
0.8145 |
| AF-K0EML1-F1-model_v4 | 1 | 329 | 2 | 314 | 0.7206 |
0.7896 |
| AF-O80456-F1-model_v4 | 1 | 347 | 81 | 451 | 0.6957 |
0.8212 |
| AF-Q0JCZ2-F1-model_v4 | 1 | 347 | 80 | 450 | 0.6931 |
0.8248 |
| AF-O25065-F1-model_v4 | 6 | 329 | 1 | 290 | 0.6778 |
0.7681 |
| AF-Q9HUG2-F1-model_v4 | 1 | 324 | 11 | 298 | 0.6677 |
0.7677 |
| AF-Q8ZMM6-F1-model_v4 | 1 | 328 | 9 | 298 | 0.6377 |
0.7327 |
| AF-Q8DQR0-F1-model_v4 | 1 | 338 | 1 | 403 | 0.6358 |
0.7302 |
| AF-Q2FZ34-F1-model_v4 | 1 | 343 | 1 | 414 | 0.6223 |
0.7101 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5K7YHP0-F1-model_v4 | GT4 | 1 | 347 | 347 | 710 | 0.6289 |
0.8608 |
| A0R4V1 | GT2 | 1 | 354 | 305 | 678 | 0.6231 |
0.8324 |
| AF-Q2IPR1-F1-model_v4 | GT4 | 1 | 342 | 346 | 684 | 0.6131 |
0.8495 |
| AF-B8JF70-F1-model_v4 | GT4 | 1 | 330 | 347 | 674 | 0.6009 |
0.8592 |
| A0A4U1HM25 | GT4 | 1 | 350 | 351 | 696 | 0.6004 |
0.8197 |
| AF-A4Q9U6-F1-model_v4 | GT4 | 1 | 350 | 388 | 736 | 0.6003 |
0.829 |
| AF-Q5KSB3-F1-model_v4 | GT4 | 1 | 350 | 388 | 736 | 0.599 |
0.8268 |
| BDG08718.1 | GT4 | 1 | 330 | 395 | 727 | 0.5986 |
0.8723 |
| AF-B4UGN4-F1-model_v4 | GT4 | 1 | 330 | 347 | 674 | 0.598 |
0.8549 |
| AF-A0A0B6TIX1-F1-model_v4 | GT4 | 1 | 348 | 396 | 742 | 0.5951 |
0.8319 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5K7YHP0 | GT4 | 1 | 347 | 347 | 710 | 0.6289 |
0.8608 |
| A0R4V1 | GT2 | 1 | 354 | 305 | 678 | 0.6231 |
0.8324 |
| B8JF70 | GT4 | 1 | 330 | 347 | 674 | 0.6009 |
0.8592 |
| A0A4U1HM25 | GT4 | 1 | 350 | 351 | 696 | 0.6004 |
0.8197 |
| BDG08718.1 | GT4 | 1 | 330 | 395 | 727 | 0.5986 |
0.8723 |
| A0A0F6WPF6 | GT4 | 1 | 350 | 388 | 736 | 0.5916 |
0.8169 |
| WIM71735.1 | GT4 | 1 | 354 | 387 | 754 | 0.5736 |
0.7981 |
| A0A1Y0CB11 | GT4 | 1 | 347 | 406 | 755 | 0.5485 |
0.77 |
| A0A6H1RBS1 | GT1 | 1 | 339 | 336 | 645 | 0.5414 |
0.8098 |
| A0A7U2MF49 | GH3 | 1 | 332 | 506 | 835 | 0.4081 |
0.6117 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1xix-assembly1.cif.gz_A | 4 | 340 | 1 | 335 | 0.7045 |
0.748 |
| 1xe4-assembly1.cif.gz_A | 4 | 340 | 1 | 335 | 0.7041 |
0.7481 |
| 7z6a-assembly1.cif.gz_A | 4 | 339 | 1 | 332 | 0.6996 |
0.7464 |
| 2hqy-assembly1.cif.gz_B | 4 | 328 | 1 | 296 | 0.6908 |
0.7755 |
| 4v36-assembly2.cif.gz_B | 4 | 343 | 1 | 306 | 0.6884 |
0.7666 |
| 5vrv-assembly3.cif.gz_E | 10 | 340 | 1 | 300 | 0.6845 |
0.7783 |
| 5vrv-assembly2.cif.gz_D | 10 | 340 | 1 | 301 | 0.6845 |
0.775 |
| 5vrv-assembly1.cif.gz_B | 10 | 340 | 1 | 302 | 0.6836 |
0.7728 |
| 5vrv-assembly1.cif.gz_A | 10 | 340 | 1 | 303 | 0.6785 |
0.7683 |
| 4v36-assembly1.cif.gz_A | 4 | 341 | 1 | 314 | 0.6759 |
0.7476 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D3Q4A8-F1-model_v4 | 1 | 332 | 1 | 306 | 0.6671 |
0.7408 |
| AF-D7C376-F1-model_v4 | 1 | 339 | 7 | 308 | 0.643 |
0.726 |
| AF-C7QKH8-F1-model_v4 | 1 | 326 | 2 | 314 | 0.6275 |
0.6934 |
| AF-A8LDL3-F1-model_v4 | 1 | 335 | 1 | 322 | 0.6206 |
0.6771 |
| AF-A1ULU4-F1-model_v4 | 1 | 337 | 2 | 300 | 0.5965 |
0.6748 |
| AF-A3Q695-F1-model_v4 | 1 | 337 | 2 | 300 | 0.5951 |
0.6734 |
| AF-Q1B3A6-F1-model_v4 | 1 | 337 | 2 | 300 | 0.5926 |
0.6709 |
| AF-C0ZP17-F1-model_v4 | 4 | 339 | 1 | 299 | 0.5813 |
0.6576 |
| AF-A4ZHT6-F1-model_v4 | 1 | 336 | 2 | 295 | 0.5792 |
0.661 |
| AF-Q9LTR9-F1-model_v4 | 1 | 347 | 91 | 425 | 0.5282 |
0.6273 |