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Cluster: HRGMv2_3777_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3777_47 HRGMv2_3777_47_5 3055 4188 + GT4
NULL(UNKNOWN) HRGMv2_3777_47 HRGMv2_3777_47_6 4238 4405 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3777_47 HRGMv2_3777_47_7 4428 5588 - GH180
NULL(UNKNOWN) HRGMv2_3777_47 HRGMv2_3777_47_8 5605 6972 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3777_47 HRGMv2_3777_47_9 6969 8453 - FGGY_N | FGGY_C
CAZyme HRGMv2_3777_47 HRGMv2_3777_47_10 8458 9594 - GH28
NULL(UNKNOWN) HRGMv2_3777_47 HRGMv2_3777_47_11 9610 11088 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3777_47 HRGMv2_3777_47_12 11102 12319 - 2.A.1.2.20
Gene ID: HRGMv2_3777_47_5
Type: CAZyme
Location: 3055 - 4188 (+)
Gene ID: HRGMv2_3777_47_6
Type:
Location: 4238 - 4405 (-)
Gene ID: HRGMv2_3777_47_7
Type: CAZyme
Location: 4428 - 5588 (-)
Gene ID: HRGMv2_3777_47_8
Type:
Location: 5605 - 6972 (-)
Gene ID: HRGMv2_3777_47_9
Type: pfam
Location: 6969 - 8453 (-)
Gene ID: HRGMv2_3777_47_10
Type: CAZyme
Location: 8458 - 9594 (-)
Gene ID: HRGMv2_3777_47_11
Type:
Location: 9610 - 11088 (-)
Gene ID: HRGMv2_3777_47_12
Type: TC
Location: 11102 - 12319 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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