PROTEIN: HRGMv2_3777_47_11
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Protein File & Metadata
Source:
HRGMv2_3777_47_11.pdb
Genome ID:
Protein ID:
HRGMv2_3777_47_11
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Protein Sequence
MNGTLMIGWS EADITPDSLG KQIPLYGQYY TRIAKGIHSR LKNVVLAVSS GDDYFITGSI 60 DNGGCPQQFV DRLREEVAKR DPSIDTKKIF LNAIHTHSAP SIAFRNTEKG VVGVATAAWN 120 KLRDETLTPE EYADFAIPII ADNIIRAWKS RKPGGIARAF GNARIGHCRR AVYSNGKAEM 180 YGDTTRPDFI GMEAGEDTGI EMLFTFDEQG KRTGMILNAA CPSQNMESTY VVSSDFAGAA 240 RELLKKEYGE EFHTIYQISP AGCQSPRDLV RHYTTEPDFW HADGVPVLAE RLLDAVRSAV 300 PGPIDYSPVL KSRVVNVTLP RRRASYMDFK EAQAELARLT AIMPEDRAFE EFCAETHANE 360 KLDGPGPYDS KLHHFVLIKN AQAVIKRYED QDANPEYVFD MNVIRLGDIA IANNPFELYL 420 YYGQNIKARS HAFQTFLVQL SGGGNFHAGY LPSPDAEKFG GYGGLIINGQ VGSDGGYKLA 480 DITADEINKL FE 492
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5K4ERM4-F1-model_v4 | 1 | 492 | 24 | 551 | 0.6858 |
0.765 |
| AF-O06769-F1-model_v4 | 4 | 492 | 1 | 493 | 0.6578 |
0.7546 |
| AF-Q9I596-F1-model_v4 | 2 | 492 | 26 | 512 | 0.6536 |
0.7681 |
| AF-K0EPA9-F1-model_v4 | 1 | 492 | 40 | 534 | 0.6514 |
0.7646 |
| AF-Q54BK2-F1-model_v4 | 1 | 492 | 36 | 559 | 0.6422 |
0.7664 |
| AF-Q9VA70-F1-model_v4 | 1 | 492 | 21 | 549 | 0.6413 |
0.7614 |
| AF-Q55G11-F1-model_v4 | 1 | 492 | 42 | 565 | 0.6391 |
0.7643 |
| AF-A0A3Q0KPD2-F1-model_v4 | 1 | 492 | 24 | 551 | 0.6387 |
0.7649 |
| AF-Q5W7F1-F1-model_v4 | 1 | 492 | 56 | 578 | 0.632 |
0.766 |
| AF-A0A0R0GS00-F1-model_v4 | 1 | 492 | 22 | 589 | 0.6314 |
0.7665 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MHD2-F1-model_v4 | CE0 | 1 | 492 | 38 | 476 | 0.6027 |
0.8444 |
| AF-A0A3G9EBB9-F1-model_v4 | CE0 | 1 | 492 | 36 | 467 | 0.6024 |
0.8462 |
| AF-G0IWC7-F1-model_v4 | CE0 | 2 | 492 | 26 | 454 | 0.5978 |
0.8445 |
| AF-A0A0H4PED2-F1-model_v4 | CE0 | 2 | 492 | 28 | 456 | 0.5972 |
0.8449 |
| A0A553JQQ1 | CBM0 , CBM92 | 2 | 492 | 33 | 529 | 0.57 |
0.7628 |
| AF-A0A1H2G217-F1-model_v4 | GH13_23 | 3 | 492 | 1 | 419 | 0.5591 |
0.8597 |
| AF-A0A1H2CQD8-F1-model_v4 | GH13_23 | 3 | 492 | 1 | 435 | 0.5587 |
0.8337 |
| A0A7S9KUB8 | GT31 | 1 | 492 | 103 | 650 | 0.5235 |
0.7657 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A553JQQ1 | CBM0 , CBM92 | 2 | 492 | 33 | 529 | 0.57 |
0.7628 |
| A0A1H2CQD8 | GH13_23 | 3 | 492 | 1 | 435 | 0.5587 |
0.8337 |
| A0A7S9KUB8 | GT31 | 1 | 492 | 103 | 650 | 0.5235 |
0.7657 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2zxc-assembly2.cif.gz_B | 2 | 492 | 1 | 487 | 0.6627 |
0.766 |
| 2zws-assembly1.cif.gz_A | 1 | 492 | 1 | 473 | 0.6589 |
0.7759 |
| 4wgk-assembly2.cif.gz_B | 2 | 492 | 1 | 521 | 0.6539 |
0.7634 |
| 4wgk-assembly1.cif.gz_A | 2 | 492 | 1 | 520 | 0.6537 |
0.7623 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O06769-F1-model_v4 | 4 | 492 | 1 | 493 | 0.6578 |
0.7546 |
| AF-Q9I596-F1-model_v4 | 2 | 492 | 26 | 512 | 0.6536 |
0.7681 |
| AF-Q54BK2-F1-model_v4 | 1 | 492 | 36 | 559 | 0.6422 |
0.7664 |
| AF-Q29C43-F1-model_v4 | 1 | 492 | 21 | 549 | 0.6418 |
0.762 |
| AF-Q9VA70-F1-model_v4 | 1 | 492 | 21 | 549 | 0.6413 |
0.7614 |
| AF-Q55G11-F1-model_v4 | 1 | 492 | 42 | 565 | 0.6391 |
0.7643 |
| AF-Q5W7F1-F1-model_v4 | 1 | 492 | 56 | 578 | 0.632 |
0.766 |
| AF-Q9JHE3-F1-model_v4 | 1 | 492 | 74 | 595 | 0.6253 |
0.7628 |
| AF-Q304B9-F1-model_v4 | 1 | 492 | 22 | 602 | 0.6248 |
0.7627 |
| AF-Q91XT9-F1-model_v4 | 1 | 492 | 79 | 600 | 0.6243 |
0.7634 |