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Cluster: HRGMv2_3772_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3772_35 HRGMv2_3772_35_3 1525 3225 + GH63
CAZyme HRGMv2_3772_35 HRGMv2_3772_35_4 3583 6180 - CBM51 | GH36
pfam HRGMv2_3772_35 HRGMv2_3772_35_5 6246 7241 - 2-Hacid_dh | 2-Hacid_dh_C
NULL(UNKNOWN) HRGMv2_3772_35 HRGMv2_3772_35_6 7246 7413 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3772_35 HRGMv2_3772_35_7 7460 9802 + 3.A.3.5.4
pfam HRGMv2_3772_35 HRGMv2_3772_35_8 9806 10237 - 4HBT
TC HRGMv2_3772_35 HRGMv2_3772_35_9 10334 13669 - 9.A.25.1.1
CAZyme HRGMv2_3772_35 HRGMv2_3772_35_10 13699 16074 - GH95
Gene ID: HRGMv2_3772_35_3
Type: CAZyme
Location: 1525 - 3225 (+)
Gene ID: HRGMv2_3772_35_4
Type: CAZyme
Location: 3583 - 6180 (-)
Gene ID: HRGMv2_3772_35_5
Type: pfam
Location: 6246 - 7241 (-)
Gene ID: HRGMv2_3772_35_6
Type:
Location: 7246 - 7413 (+)
Gene ID: HRGMv2_3772_35_7
Type: TC
Location: 7460 - 9802 (+)
Gene ID: HRGMv2_3772_35_8
Type: pfam
Location: 9806 - 10237 (-)
Gene ID: HRGMv2_3772_35_9
Type: TC
Location: 10334 - 13669 (-)
Gene ID: HRGMv2_3772_35_10
Type: CAZyme
Location: 13699 - 16074 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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