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Cluster: HRGMv2_3772_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3772_33 HRGMv2_3772_33_10 8741 10012 - 2.A.45.2.2
pfam HRGMv2_3772_33 HRGMv2_3772_33_11 10009 10368 - CxxCxxCC
STP HRGMv2_3772_33 HRGMv2_3772_33_12 10473 12131 + SpoIIE
TC HRGMv2_3772_33 HRGMv2_3772_33_13 12318 13562 + 3.D.1.5.1
TC HRGMv2_3772_33 HRGMv2_3772_33_14 13627 14208 + 3.D.1.2.1
TC HRGMv2_3772_33 HRGMv2_3772_33_15 14254 15642 + 3.D.1.3.1
TC HRGMv2_3772_33 HRGMv2_3772_33_16 15675 17417 + 3.D.1.6.3
TC HRGMv2_3772_33 HRGMv2_3772_33_17 17448 18764 + 3.D.1.5.1
STP HRGMv2_3772_33 HRGMv2_3772_33_18 18785 19351 + Fer4 | Fer4
TC HRGMv2_3772_33 HRGMv2_3772_33_19 19405 20463 + 3.D.1.1.1
TC HRGMv2_3772_33 HRGMv2_3772_33_20 20506 20823 + 3.D.1.3.1
TC HRGMv2_3772_33 HRGMv2_3772_33_21 20848 22674 + 3.D.1.1.1
TC HRGMv2_3772_33 HRGMv2_3772_33_22 22696 24135 + 3.D.1.1.1
TC HRGMv2_3772_33 HRGMv2_3772_33_23 24173 25624 + 3.D.9.1.1
CAZyme HRGMv2_3772_33 HRGMv2_3772_33_24 25839 27806 + GH97
pfam HRGMv2_3772_33 HRGMv2_3772_33_25 27844 30597 + ResIII
CAZyme HRGMv2_3772_33 HRGMv2_3772_33_26 30676 32898 - GH105
pfam HRGMv2_3772_33 HRGMv2_3772_33_27 32980 33471 - YdjM
TC HRGMv2_3772_33 HRGMv2_3772_33_28 33604 35610 + 1.B.12.4.4
Gene ID: HRGMv2_3772_33_10
Type: TC
Location: 8741 - 10012 (-)
Gene ID: HRGMv2_3772_33_11
Type: pfam
Location: 10009 - 10368 (-)
Gene ID: HRGMv2_3772_33_12
Type: STP
Location: 10473 - 12131 (+)
Gene ID: HRGMv2_3772_33_13
Type: TC
Location: 12318 - 13562 (+)
Gene ID: HRGMv2_3772_33_14
Type: TC
Location: 13627 - 14208 (+)
Gene ID: HRGMv2_3772_33_15
Type: TC
Location: 14254 - 15642 (+)
Gene ID: HRGMv2_3772_33_16
Type: TC
Location: 15675 - 17417 (+)
Gene ID: HRGMv2_3772_33_17
Type: TC
Location: 17448 - 18764 (+)
Gene ID: HRGMv2_3772_33_18
Type: STP
Location: 18785 - 19351 (+)
Gene ID: HRGMv2_3772_33_19
Type: TC
Location: 19405 - 20463 (+)
Gene ID: HRGMv2_3772_33_20
Type: TC
Location: 20506 - 20823 (+)
Gene ID: HRGMv2_3772_33_21
Type: TC
Location: 20848 - 22674 (+)
Gene ID: HRGMv2_3772_33_22
Type: TC
Location: 22696 - 24135 (+)
Gene ID: HRGMv2_3772_33_23
Type: TC
Location: 24173 - 25624 (+)
Gene ID: HRGMv2_3772_33_24
Type: CAZyme
Location: 25839 - 27806 (+)
Gene ID: HRGMv2_3772_33_25
Type: pfam
Location: 27844 - 30597 (+)
Gene ID: HRGMv2_3772_33_26
Type: CAZyme
Location: 30676 - 32898 (-)
Gene ID: HRGMv2_3772_33_27
Type: pfam
Location: 32980 - 33471 (-)
Gene ID: HRGMv2_3772_33_28
Type: TC
Location: 33604 - 35610 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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