dbCAN Logo

Cluster: HRGMv2_3772_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3772_15 HRGMv2_3772_15_36 39380 40597 + 9.B.169.1.8
pfam HRGMv2_3772_15 HRGMv2_3772_15_37 40656 41543 - Aminotran_4
pfam HRGMv2_3772_15 HRGMv2_3772_15_38 41709 43385 + SurA_N_2 | SurA_N_3
TC HRGMv2_3772_15 HRGMv2_3772_15_39 43413 44813 + 2.A.17.4.7
CAZyme HRGMv2_3772_15 HRGMv2_3772_15_40 44933 47107 + GH31_1
TC HRGMv2_3772_15 HRGMv2_3772_15_41 47356 48042 + 2.A.115.2.8
TC HRGMv2_3772_15 HRGMv2_3772_15_42 48107 49555 + 3.B.1.1.1
Gene ID: HRGMv2_3772_15_36
Type: TC
Location: 39380 - 40597 (+)
Gene ID: HRGMv2_3772_15_37
Type: pfam
Location: 40656 - 41543 (-)
Gene ID: HRGMv2_3772_15_38
Type: pfam
Location: 41709 - 43385 (+)
Gene ID: HRGMv2_3772_15_39
Type: TC
Location: 43413 - 44813 (+)
Gene ID: HRGMv2_3772_15_40
Type: CAZyme
Location: 44933 - 47107 (+)
Gene ID: HRGMv2_3772_15_41
Type: TC
Location: 47356 - 48042 (+)
Gene ID: HRGMv2_3772_15_42
Type: TC
Location: 48107 - 49555 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List