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Cluster: HRGMv2_3772_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3772_13 HRGMv2_3772_13_45 51154 52839 + 3.A.15.4.1
TC HRGMv2_3772_13 HRGMv2_3772_13_46 52870 54537 + 3.A.15.4.1
TC HRGMv2_3772_13 HRGMv2_3772_13_47 54607 55884 + 3.A.11.1.3
pfam HRGMv2_3772_13 HRGMv2_3772_13_48 55900 56484 + N_methyl
pfam HRGMv2_3772_13 HRGMv2_3772_13_49 56639 59611 + Autotransporter
CAZyme HRGMv2_3772_13 HRGMv2_3772_13_50 59985 62330 + GH95
CAZyme HRGMv2_3772_13 HRGMv2_3772_13_51 62556 64343 - GH181
pfam HRGMv2_3772_13 HRGMv2_3772_13_52 64450 64869 + PNPOx_N | Pyrid_ox_like
pfam HRGMv2_3772_13 HRGMv2_3772_13_53 64880 66004 + Ank | Ank | Ank | Ank_2 | Ank_2 | Ank_4
TC HRGMv2_3772_13 HRGMv2_3772_13_54 66163 67548 + 3.A.1.5.32
TC HRGMv2_3772_13 HRGMv2_3772_13_55 67556 69166 + 3.A.1.5.21
STP HRGMv2_3772_13 HRGMv2_3772_13_56 69187 71448 + SBP_bac_5
TC HRGMv2_3772_13 HRGMv2_3772_13_57 71445 72428 + 3.A.1.5.29
TC HRGMv2_3772_13 HRGMv2_3772_13_58 72467 73501 + 3.A.1.5.20
CAZyme HRGMv2_3772_13 HRGMv2_3772_13_59 73521 75944 + GH35
Gene ID: HRGMv2_3772_13_45
Type: TC
Location: 51154 - 52839 (+)
Gene ID: HRGMv2_3772_13_46
Type: TC
Location: 52870 - 54537 (+)
Gene ID: HRGMv2_3772_13_47
Type: TC
Location: 54607 - 55884 (+)
Gene ID: HRGMv2_3772_13_48
Type: pfam
Location: 55900 - 56484 (+)
Gene ID: HRGMv2_3772_13_49
Type: pfam
Location: 56639 - 59611 (+)
Gene ID: HRGMv2_3772_13_50
Type: CAZyme
Location: 59985 - 62330 (+)
Gene ID: HRGMv2_3772_13_51
Type: CAZyme
Location: 62556 - 64343 (-)
Gene ID: HRGMv2_3772_13_52
Type: pfam
Location: 64450 - 64869 (+)
Gene ID: HRGMv2_3772_13_53
Type: pfam
Location: 64880 - 66004 (+)
Gene ID: HRGMv2_3772_13_54
Type: TC
Location: 66163 - 67548 (+)
Gene ID: HRGMv2_3772_13_55
Type: TC
Location: 67556 - 69166 (+)
Gene ID: HRGMv2_3772_13_56
Type: STP
Location: 69187 - 71448 (+)
Gene ID: HRGMv2_3772_13_57
Type: TC
Location: 71445 - 72428 (+)
Gene ID: HRGMv2_3772_13_58
Type: TC
Location: 72467 - 73501 (+)
Gene ID: HRGMv2_3772_13_59
Type: CAZyme
Location: 73521 - 75944 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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