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Cluster: HRGMv2_3772_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3772_8 HRGMv2_3772_8_22 33513 34298 + 1.B.71.1.5
CAZyme HRGMv2_3772_8 HRGMv2_3772_8_23 34402 36957 + GH89
CAZyme HRGMv2_3772_8 HRGMv2_3772_8_24 37027 38898 - GH20
NULL(UNKNOWN) HRGMv2_3772_8 HRGMv2_3772_8_25 38910 39152 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3772_8 HRGMv2_3772_8_26 39300 41525 - GH36
Gene ID: HRGMv2_3772_8_22
Type: TC
Location: 33513 - 34298 (+)
Gene ID: HRGMv2_3772_8_23
Type: CAZyme
Location: 34402 - 36957 (+)
Gene ID: HRGMv2_3772_8_24
Type: CAZyme
Location: 37027 - 38898 (-)
Gene ID: HRGMv2_3772_8_25
Type:
Location: 38910 - 39152 (+)
Gene ID: HRGMv2_3772_8_26
Type: CAZyme
Location: 39300 - 41525 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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