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Cluster: HRGMv2_3772_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3772_6 HRGMv2_3772_6_51 63193 63852 + 3.A.1.122.15
pfam HRGMv2_3772_6 HRGMv2_3772_6_52 63968 64585 + Pro_isomerase
CAZyme HRGMv2_3772_6 HRGMv2_3772_6_53 64633 65781 + CE9
NULL(UNKNOWN) HRGMv2_3772_6 HRGMv2_3772_6_54 65617 65970 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3772_6 HRGMv2_3772_6_55 65974 67002 + Biotin_lipoyl | E3_binding
CAZyme HRGMv2_3772_6 HRGMv2_3772_6_56 67002 68522 + GH20
pfam HRGMv2_3772_6 HRGMv2_3772_6_57 68660 69295 - RRM_1
STP HRGMv2_3772_6 HRGMv2_3772_6_58 69656 70360 - TrkA_C
TC HRGMv2_3772_6 HRGMv2_3772_6_59 70372 72138 - 2.A.38.4.5
pfam HRGMv2_3772_6 HRGMv2_3772_6_60 72228 73001 + His_biosynth
CAZyme HRGMv2_3772_6 HRGMv2_3772_6_61 73183 75141 + GH20
Gene ID: HRGMv2_3772_6_51
Type: TC
Location: 63193 - 63852 (+)
Gene ID: HRGMv2_3772_6_52
Type: pfam
Location: 63968 - 64585 (+)
Gene ID: HRGMv2_3772_6_53
Type: CAZyme
Location: 64633 - 65781 (+)
Gene ID: HRGMv2_3772_6_54
Type:
Location: 65617 - 65970 (-)
Gene ID: HRGMv2_3772_6_55
Type: pfam
Location: 65974 - 67002 (+)
Gene ID: HRGMv2_3772_6_56
Type: CAZyme
Location: 67002 - 68522 (+)
Gene ID: HRGMv2_3772_6_57
Type: pfam
Location: 68660 - 69295 (-)
Gene ID: HRGMv2_3772_6_58
Type: STP
Location: 69656 - 70360 (-)
Gene ID: HRGMv2_3772_6_59
Type: TC
Location: 70372 - 72138 (-)
Gene ID: HRGMv2_3772_6_60
Type: pfam
Location: 72228 - 73001 (+)
Gene ID: HRGMv2_3772_6_61
Type: CAZyme
Location: 73183 - 75141 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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