dbCAN Logo

Cluster: HRGMv2_3772_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3772_6 HRGMv2_3772_6_7 6578 8017 + 2.A.114.1.4
TC HRGMv2_3772_6 HRGMv2_3772_6_8 8177 8893 + 3.D.10.1.2
TC HRGMv2_3772_6 HRGMv2_3772_6_9 8915 10873 + 3.D.10.1.2
TC HRGMv2_3772_6 HRGMv2_3772_6_10 10910 11677 + 3.D.10.1.2
peptidase HRGMv2_3772_6 HRGMv2_3772_6_11 11834 12403 + C56.UNW
pfam HRGMv2_3772_6 HRGMv2_3772_6_12 12453 13418 + Thioredoxin | Thioredox_DsbH | Thioredoxin_2 | Thioredoxin_7
CAZyme HRGMv2_3772_6 HRGMv2_3772_6_13 13445 15691 + CBM51 | GH110
Gene ID: HRGMv2_3772_6_7
Type: TC
Location: 6578 - 8017 (+)
Gene ID: HRGMv2_3772_6_8
Type: TC
Location: 8177 - 8893 (+)
Gene ID: HRGMv2_3772_6_9
Type: TC
Location: 8915 - 10873 (+)
Gene ID: HRGMv2_3772_6_10
Type: TC
Location: 10910 - 11677 (+)
Gene ID: HRGMv2_3772_6_11
Type: peptidase
Location: 11834 - 12403 (+)
Gene ID: HRGMv2_3772_6_12
Type: pfam
Location: 12453 - 13418 (+)
Gene ID: HRGMv2_3772_6_13
Type: CAZyme
Location: 13445 - 15691 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List