Cluster: HRGMv2_3764_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3764
- CGC Family ID: CGCFAM_00015
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_3 | HRGMv2_3764_3_117 | 134641 | 135786 | - | GT4 |
| CAZyme | HRGMv2_3764_3 | HRGMv2_3764_3_118 | 135811 | 137034 | - | GT4 |
| TC | HRGMv2_3764_3 | HRGMv2_3764_3_119 | 137390 | 138949 | + | 2.A.66.1.40 |
| NULL(UNKNOWN) | HRGMv2_3764_3 | HRGMv2_3764_3_120 | 139006 | 140253 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3764_3 | HRGMv2_3764_3_121 | 140377 | 140724 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3764_3 | HRGMv2_3764_3_122 | 141280 | 142344 | + | GT2 |
Gene ID: HRGMv2_3764_3_117
Type: CAZyme
Location: 134641 - 135786 (-)
Type: CAZyme
Location: 134641 - 135786 (-)
Gene ID: HRGMv2_3764_3_118
Type: CAZyme
Location: 135811 - 137034 (-)
Type: CAZyme
Location: 135811 - 137034 (-)
Gene ID: HRGMv2_3764_3_119
Type: TC
Location: 137390 - 138949 (+)
Type: TC
Location: 137390 - 138949 (+)
Gene ID: HRGMv2_3764_3_120
Type:
Location: 139006 - 140253 (-)
Type:
Location: 139006 - 140253 (-)
Gene ID: HRGMv2_3764_3_121
Type:
Location: 140377 - 140724 (-)
Type:
Location: 140377 - 140724 (-)
Gene ID: HRGMv2_3764_3_122
Type: CAZyme
Location: 141280 - 142344 (+)
Type: CAZyme
Location: 141280 - 142344 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.