Cluster: HRGMv2_3764_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- CGC Family ID: CGCFAM_04657
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_2 | HRGMv2_3764_2_152 | 198467 | 200326 | - | GH77 |
| NULL(UNKNOWN) | HRGMv2_3764_2 | HRGMv2_3764_2_153 | 200711 | 201322 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3764_2 | HRGMv2_3764_2_154 | 201438 | 202796 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_3764_2 | HRGMv2_3764_2_155 | 202823 | 204259 | - | 8.A.21.2.1 |
Gene ID: HRGMv2_3764_2_152
Type: CAZyme
Location: 198467 - 200326 (-)
Type: CAZyme
Location: 198467 - 200326 (-)
Gene ID: HRGMv2_3764_2_153
Type:
Location: 200711 - 201322 (+)
Type:
Location: 200711 - 201322 (+)
Gene ID: HRGMv2_3764_2_154
Type: pfam
Location: 201438 - 202796 (-)
Type: pfam
Location: 201438 - 202796 (-)
Gene ID: HRGMv2_3764_2_155
Type: TC
Location: 202823 - 204259 (-)
Type: TC
Location: 202823 - 204259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.