Cluster: HRGMv2_3764_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- CGC Family ID: CGCFAM_10429
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3764_2 | HRGMv2_3764_2_146 | 188072 | 190987 | + | 3.A.3.2.42 |
| CAZyme | HRGMv2_3764_2 | HRGMv2_3764_2_147 | 191902 | 193368 | - | CE4 |
| TC | HRGMv2_3764_2 | HRGMv2_3764_2_148 | 193559 | 195172 | + | 2.A.111.2.1 |
Gene ID: HRGMv2_3764_2_146
Type: TC
Location: 188072 - 190987 (+)
Type: TC
Location: 188072 - 190987 (+)
Gene ID: HRGMv2_3764_2_147
Type: CAZyme
Location: 191902 - 193368 (-)
Type: CAZyme
Location: 191902 - 193368 (-)
Gene ID: HRGMv2_3764_2_148
Type: TC
Location: 193559 - 195172 (+)
Type: TC
Location: 193559 - 195172 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.