Cluster: HRGMv2_3764_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_2 | HRGMv2_3764_2_102 | 139776 | 140597 | - | GT2 |
| CAZyme | HRGMv2_3764_2 | HRGMv2_3764_2_103 | 140606 | 141550 | - | GT2 |
| pfam | HRGMv2_3764_2 | HRGMv2_3764_2_104 | 141687 | 142355 | - | N_methyl |
| TC | HRGMv2_3764_2 | HRGMv2_3764_2_105 | 142375 | 143643 | - | 3.A.11.1.3 |
| TC | HRGMv2_3764_2 | HRGMv2_3764_2_106 | 143716 | 145374 | - | 3.A.15.4.1 |
| TC | HRGMv2_3764_2 | HRGMv2_3764_2_107 | 145403 | 147043 | - | 3.A.15.4.1 |
Gene ID: HRGMv2_3764_2_102
Type: CAZyme
Location: 139776 - 140597 (-)
Type: CAZyme
Location: 139776 - 140597 (-)
Gene ID: HRGMv2_3764_2_103
Type: CAZyme
Location: 140606 - 141550 (-)
Type: CAZyme
Location: 140606 - 141550 (-)
Gene ID: HRGMv2_3764_2_104
Type: pfam
Location: 141687 - 142355 (-)
Type: pfam
Location: 141687 - 142355 (-)
Gene ID: HRGMv2_3764_2_105
Type: TC
Location: 142375 - 143643 (-)
Type: TC
Location: 142375 - 143643 (-)
Gene ID: HRGMv2_3764_2_106
Type: TC
Location: 143716 - 145374 (-)
Type: TC
Location: 143716 - 145374 (-)
Gene ID: HRGMv2_3764_2_107
Type: TC
Location: 145403 - 147043 (-)
Type: TC
Location: 145403 - 147043 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.