Cluster: HRGMv2_3764_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3764_29 | HRGMv2_3764_29_1 | 1 | 2163 | - | 3.A.3.2.17 |
| NULL(UNKNOWN) | HRGMv2_3764_29 | HRGMv2_3764_29_2 | 2331 | 2984 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3764_29 | HRGMv2_3764_29_3 | 3094 | 5631 | - | GH36 |
Gene ID: HRGMv2_3764_29_1
Type: TC
Location: 1 - 2163 (-)
Type: TC
Location: 1 - 2163 (-)
Gene ID: HRGMv2_3764_29_2
Type:
Location: 2331 - 2984 (+)
Type:
Location: 2331 - 2984 (+)
Gene ID: HRGMv2_3764_29_3
Type: CAZyme
Location: 3094 - 5631 (-)
Type: CAZyme
Location: 3094 - 5631 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.