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Cluster: HRGMv2_3764_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3764_23 HRGMv2_3764_23_1 847 3393 - GH89
TC HRGMv2_3764_23 HRGMv2_3764_23_2 3524 6106 - 3.A.9.1.2
pfam HRGMv2_3764_23 HRGMv2_3764_23_3 6135 7190 - ATP-gua_Ptrans
pfam HRGMv2_3764_23 HRGMv2_3764_23_4 7196 7732 - UVR
TC HRGMv2_3764_23 HRGMv2_3764_23_5 7800 8663 - 3.A.1.15.1
TC HRGMv2_3764_23 HRGMv2_3764_23_6 8660 9466 - 3.A.1.15.12
NULL(UNKNOWN) HRGMv2_3764_23 HRGMv2_3764_23_7 9457 9891 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3764_23 HRGMv2_3764_23_8 9888 10829 - ZnuA
CAZyme HRGMv2_3764_23 HRGMv2_3764_23_9 11110 13971 + GH84
Gene ID: HRGMv2_3764_23_1
Type: CAZyme
Location: 847 - 3393 (-)
Gene ID: HRGMv2_3764_23_2
Type: TC
Location: 3524 - 6106 (-)
Gene ID: HRGMv2_3764_23_3
Type: pfam
Location: 6135 - 7190 (-)
Gene ID: HRGMv2_3764_23_4
Type: pfam
Location: 7196 - 7732 (-)
Gene ID: HRGMv2_3764_23_5
Type: TC
Location: 7800 - 8663 (-)
Gene ID: HRGMv2_3764_23_6
Type: TC
Location: 8660 - 9466 (-)
Gene ID: HRGMv2_3764_23_7
Type:
Location: 9457 - 9891 (-)
Gene ID: HRGMv2_3764_23_8
Type: pfam
Location: 9888 - 10829 (-)
Gene ID: HRGMv2_3764_23_9
Type: CAZyme
Location: 11110 - 13971 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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