Cluster: HRGMv2_3764_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_20 | HRGMv2_3764_20_18 | 19968 | 21632 | + | GT35 |
| TC | HRGMv2_3764_20 | HRGMv2_3764_20_19 | 21735 | 22508 | - | 1.A.1.24.5 |
| pfam | HRGMv2_3764_20 | HRGMv2_3764_20_20 | 22517 | 22876 | - | Glutaredoxin | ArsC |
| pfam | HRGMv2_3764_20 | HRGMv2_3764_20_21 | 23044 | 24450 | - | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_2 | Lactamase_B_6 |
| TC | HRGMv2_3764_20 | HRGMv2_3764_20_22 | 24849 | 25148 | - | 2.A.64.4.1 |
Gene ID: HRGMv2_3764_20_18
Type: CAZyme
Location: 19968 - 21632 (+)
Type: CAZyme
Location: 19968 - 21632 (+)
Gene ID: HRGMv2_3764_20_19
Type: TC
Location: 21735 - 22508 (-)
Type: TC
Location: 21735 - 22508 (-)
Gene ID: HRGMv2_3764_20_20
Type: pfam
Location: 22517 - 22876 (-)
Type: pfam
Location: 22517 - 22876 (-)
Gene ID: HRGMv2_3764_20_21
Type: pfam
Location: 23044 - 24450 (-)
Type: pfam
Location: 23044 - 24450 (-)
Gene ID: HRGMv2_3764_20_22
Type: TC
Location: 24849 - 25148 (-)
Type: TC
Location: 24849 - 25148 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.