Cluster: HRGMv2_3764_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_17 | HRGMv2_3764_17_32 | 29779 | 31506 | - | GH13_5 |
| TC | HRGMv2_3764_17 | HRGMv2_3764_17_33 | 31569 | 32954 | - | 2.A.66.1.32 |
| NULL(UNKNOWN) | HRGMv2_3764_17 | HRGMv2_3764_17_34 | 33130 | 33576 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3764_17 | HRGMv2_3764_17_35 | 33724 | 35865 | + | GH20 |
Gene ID: HRGMv2_3764_17_32
Type: CAZyme
Location: 29779 - 31506 (-)
Type: CAZyme
Location: 29779 - 31506 (-)
Gene ID: HRGMv2_3764_17_33
Type: TC
Location: 31569 - 32954 (-)
Type: TC
Location: 31569 - 32954 (-)
Gene ID: HRGMv2_3764_17_34
Type:
Location: 33130 - 33576 (+)
Type:
Location: 33130 - 33576 (+)
Gene ID: HRGMv2_3764_17_35
Type: CAZyme
Location: 33724 - 35865 (+)
Type: CAZyme
Location: 33724 - 35865 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.