Cluster: HRGMv2_3764_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_15 | HRGMv2_3764_15_36 | 43613 | 45262 | - | GH20 |
| pfam | HRGMv2_3764_15 | HRGMv2_3764_15_37 | 45392 | 46582 | + | MFS_1 |
| pfam | HRGMv2_3764_15 | HRGMv2_3764_15_38 | 46591 | 47736 | - | Alk_phosphatase | Metalloenzyme |
| TC | HRGMv2_3764_15 | HRGMv2_3764_15_39 | 47826 | 48239 | - | 1.A.22.1.3 |
Gene ID: HRGMv2_3764_15_36
Type: CAZyme
Location: 43613 - 45262 (-)
Type: CAZyme
Location: 43613 - 45262 (-)
Gene ID: HRGMv2_3764_15_37
Type: pfam
Location: 45392 - 46582 (+)
Type: pfam
Location: 45392 - 46582 (+)
Gene ID: HRGMv2_3764_15_38
Type: pfam
Location: 46591 - 47736 (-)
Type: pfam
Location: 46591 - 47736 (-)
Gene ID: HRGMv2_3764_15_39
Type: TC
Location: 47826 - 48239 (-)
Type: TC
Location: 47826 - 48239 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.