Cluster: HRGMv2_3764_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_15 | HRGMv2_3764_15_23 | 27166 | 29316 | + | GH36 |
| NULL(UNKNOWN) | HRGMv2_3764_15 | HRGMv2_3764_15_24 | 29313 | 29444 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3764_15 | HRGMv2_3764_15_25 | 29640 | 31253 | - | 2.A.81.1.5 |
| STP | HRGMv2_3764_15 | HRGMv2_3764_15_26 | 31367 | 31846 | - | Response_reg |
| STP | HRGMv2_3764_15 | HRGMv2_3764_15_27 | 31833 | 33314 | - | HATPase_c | cNMP_binding |
| TC | HRGMv2_3764_15 | HRGMv2_3764_15_28 | 33343 | 35082 | - | 2.A.47.1.1 |
Gene ID: HRGMv2_3764_15_23
Type: CAZyme
Location: 27166 - 29316 (+)
Type: CAZyme
Location: 27166 - 29316 (+)
Gene ID: HRGMv2_3764_15_24
Type:
Location: 29313 - 29444 (+)
Type:
Location: 29313 - 29444 (+)
Gene ID: HRGMv2_3764_15_25
Type: TC
Location: 29640 - 31253 (-)
Type: TC
Location: 29640 - 31253 (-)
Gene ID: HRGMv2_3764_15_26
Type: STP
Location: 31367 - 31846 (-)
Type: STP
Location: 31367 - 31846 (-)
Gene ID: HRGMv2_3764_15_27
Type: STP
Location: 31833 - 33314 (-)
Type: STP
Location: 31833 - 33314 (-)
Gene ID: HRGMv2_3764_15_28
Type: TC
Location: 33343 - 35082 (-)
Type: TC
Location: 33343 - 35082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.