Cluster: HRGMv2_3764_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- CGC Family ID: CGCFAM_03334
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_14 | HRGMv2_3764_14_6 | 12205 | 13482 | + | GH177 |
| pfam | HRGMv2_3764_14 | HRGMv2_3764_14_7 | 13514 | 14218 | + | Cytochrome_C7 | Cytochrome_C7 |
| TC | HRGMv2_3764_14 | HRGMv2_3764_14_8 | 14496 | 17387 | + | 5.A.3.5.1 |
Gene ID: HRGMv2_3764_14_6
Type: CAZyme
Location: 12205 - 13482 (+)
Type: CAZyme
Location: 12205 - 13482 (+)
Gene ID: HRGMv2_3764_14_7
Type: pfam
Location: 13514 - 14218 (+)
Type: pfam
Location: 13514 - 14218 (+)
Gene ID: HRGMv2_3764_14_8
Type: TC
Location: 14496 - 17387 (+)
Type: TC
Location: 14496 - 17387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.