Cluster: HRGMv2_3764_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- CGC Family ID: CGCFAM_06238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3764_13 | HRGMv2_3764_13_43 | 47551 | 49683 | - | CBM32 | GH123 |
| pfam | HRGMv2_3764_13 | HRGMv2_3764_13_44 | 49737 | 50504 | - | His_biosynth |
| TC | HRGMv2_3764_13 | HRGMv2_3764_13_45 | 50812 | 52560 | + | 2.A.38.4.3 |
Gene ID: HRGMv2_3764_13_43
Type: CAZyme
Location: 47551 - 49683 (-)
Type: CAZyme
Location: 47551 - 49683 (-)
Gene ID: HRGMv2_3764_13_44
Type: pfam
Location: 49737 - 50504 (-)
Type: pfam
Location: 49737 - 50504 (-)
Gene ID: HRGMv2_3764_13_45
Type: TC
Location: 50812 - 52560 (+)
Type: TC
Location: 50812 - 52560 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.