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Cluster: HRGMv2_3764_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3764_10 HRGMv2_3764_10_7 10357 10599 - 3.D.1.6.4
pfam HRGMv2_3764_10 HRGMv2_3764_10_8 10731 11459 - Pan_kinase
CAZyme HRGMv2_3764_10 HRGMv2_3764_10_9 11465 12592 - GT28
pfam HRGMv2_3764_10 HRGMv2_3764_10_10 12819 13763 + Formyl_trans_N | Formyl_trans_C
pfam HRGMv2_3764_10 HRGMv2_3764_10_11 13764 15770 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
TC HRGMv2_3764_10 HRGMv2_3764_10_12 15982 18267 - 2.A.21.3.2
pfam HRGMv2_3764_10 HRGMv2_3764_10_13 18280 19458 - GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
TC HRGMv2_3764_10 HRGMv2_3764_10_14 19676 21052 - 9.B.18.1.2
Gene ID: HRGMv2_3764_10_7
Type: TC
Location: 10357 - 10599 (-)
Gene ID: HRGMv2_3764_10_8
Type: pfam
Location: 10731 - 11459 (-)
Gene ID: HRGMv2_3764_10_9
Type: CAZyme
Location: 11465 - 12592 (-)
Gene ID: HRGMv2_3764_10_10
Type: pfam
Location: 12819 - 13763 (+)
Gene ID: HRGMv2_3764_10_11
Type: pfam
Location: 13764 - 15770 (+)
Gene ID: HRGMv2_3764_10_12
Type: TC
Location: 15982 - 18267 (-)
Gene ID: HRGMv2_3764_10_13
Type: pfam
Location: 18280 - 19458 (-)
Gene ID: HRGMv2_3764_10_14
Type: TC
Location: 19676 - 21052 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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