Cluster: HRGMv2_3764_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- CGC Family ID: CGCFAM_03333
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3764_7 | HRGMv2_3764_7_2 | 1128 | 1760 | - | 9.B.124.1.7 |
| sulfatase | HRGMv2_3764_7 | HRGMv2_3764_7_3 | 1769 | 3928 | - | S1_20 |
| TC | HRGMv2_3764_7 | HRGMv2_3764_7_4 | 4395 | 6200 | - | 3.A.18.1.1 |
| NULL(UNKNOWN) | HRGMv2_3764_7 | HRGMv2_3764_7_5 | 6393 | 7196 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3764_7 | HRGMv2_3764_7_6 | 7207 | 8745 | + | CE20 |
Gene ID: HRGMv2_3764_7_2
Type: TC
Location: 1128 - 1760 (-)
Type: TC
Location: 1128 - 1760 (-)
Gene ID: HRGMv2_3764_7_3
Type: sulfatase
Location: 1769 - 3928 (-)
Type: sulfatase
Location: 1769 - 3928 (-)
Gene ID: HRGMv2_3764_7_4
Type: TC
Location: 4395 - 6200 (-)
Type: TC
Location: 4395 - 6200 (-)
Gene ID: HRGMv2_3764_7_5
Type:
Location: 6393 - 7196 (+)
Type:
Location: 6393 - 7196 (+)
Gene ID: HRGMv2_3764_7_6
Type: CAZyme
Location: 7207 - 8745 (+)
Type: CAZyme
Location: 7207 - 8745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.