Cluster: HRGMv2_3764_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3764
- CGC Family ID: CGCFAM_03459
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3764_5 | HRGMv2_3764_5_105 | 108328 | 110115 | - | 2.A.49.6.4 |
| NULL(UNKNOWN) | HRGMv2_3764_5 | HRGMv2_3764_5_106 | 110283 | 111077 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3764_5 | HRGMv2_3764_5_107 | 111292 | 113289 | + | GH20 |
Gene ID: HRGMv2_3764_5_105
Type: TC
Location: 108328 - 110115 (-)
Type: TC
Location: 108328 - 110115 (-)
Gene ID: HRGMv2_3764_5_106
Type:
Location: 110283 - 111077 (-)
Type:
Location: 110283 - 111077 (-)
Gene ID: HRGMv2_3764_5_107
Type: CAZyme
Location: 111292 - 113289 (+)
Type: CAZyme
Location: 111292 - 113289 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.