dbCAN Logo

Cluster: HRGMv2_3764_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_63 73377 74414 - GT2
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_64 74469 75473 - GT2
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_65 75499 76347 - GT2
NULL(UNKNOWN) HRGMv2_3764_4 HRGMv2_3764_4_66 76351 76890 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3764_4 HRGMv2_3764_4_67 76919 78490 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_68 78518 79693 - GT4
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_69 79690 80829 - GT4
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_70 80829 81872 - GT4
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_71 81875 82705 - GT11
pfam HRGMv2_3764_4 HRGMv2_3764_4_72 82695 83834 - Wzy_C
NULL(UNKNOWN) HRGMv2_3764_4 HRGMv2_3764_4_73 83875 84840 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_74 84837 86009 - GT4
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_75 86043 87221 - GT4
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_76 87218 88375 - GT4
CAZyme HRGMv2_3764_4 HRGMv2_3764_4_77 88410 89186 - GT2
TC HRGMv2_3764_4 HRGMv2_3764_4_78 89217 90062 - 9.B.18.1.2
pfam HRGMv2_3764_4 HRGMv2_3764_4_79 90103 90774 - CpsB_CapC
TC HRGMv2_3764_4 HRGMv2_3764_4_80 90840 93254 - 8.A.3.1.2
TC HRGMv2_3764_4 HRGMv2_3764_4_81 93384 94166 - 1.B.18.3.2
TC HRGMv2_3764_4 HRGMv2_3764_4_82 95081 97606 + 3.A.12.1.1
Gene ID: HRGMv2_3764_4_63
Type: CAZyme
Location: 73377 - 74414 (-)
Gene ID: HRGMv2_3764_4_64
Type: CAZyme
Location: 74469 - 75473 (-)
Gene ID: HRGMv2_3764_4_65
Type: CAZyme
Location: 75499 - 76347 (-)
Gene ID: HRGMv2_3764_4_66
Type:
Location: 76351 - 76890 (-)
Gene ID: HRGMv2_3764_4_67
Type:
Location: 76919 - 78490 (-)
Gene ID: HRGMv2_3764_4_68
Type: CAZyme
Location: 78518 - 79693 (-)
Gene ID: HRGMv2_3764_4_69
Type: CAZyme
Location: 79690 - 80829 (-)
Gene ID: HRGMv2_3764_4_70
Type: CAZyme
Location: 80829 - 81872 (-)
Gene ID: HRGMv2_3764_4_71
Type: CAZyme
Location: 81875 - 82705 (-)
Gene ID: HRGMv2_3764_4_72
Type: pfam
Location: 82695 - 83834 (-)
Gene ID: HRGMv2_3764_4_73
Type:
Location: 83875 - 84840 (-)
Gene ID: HRGMv2_3764_4_74
Type: CAZyme
Location: 84837 - 86009 (-)
Gene ID: HRGMv2_3764_4_75
Type: CAZyme
Location: 86043 - 87221 (-)
Gene ID: HRGMv2_3764_4_76
Type: CAZyme
Location: 87218 - 88375 (-)
Gene ID: HRGMv2_3764_4_77
Type: CAZyme
Location: 88410 - 89186 (-)
Gene ID: HRGMv2_3764_4_78
Type: TC
Location: 89217 - 90062 (-)
Gene ID: HRGMv2_3764_4_79
Type: pfam
Location: 90103 - 90774 (-)
Gene ID: HRGMv2_3764_4_80
Type: TC
Location: 90840 - 93254 (-)
Gene ID: HRGMv2_3764_4_81
Type: TC
Location: 93384 - 94166 (-)
Gene ID: HRGMv2_3764_4_82
Type: TC
Location: 95081 - 97606 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3764_4_63 vegetarian > omnivore 1.42152 0.03161
HRGMv2_3764_4_63 vegetarian > vegan 1.17785 0.00565
HRGMv2_3764_4_69 vegetarian > omnivore 1.17012 0.04057
HRGMv2_3764_4_69 vegetarian > vegan 1.38455 0.00565
HRGMv2_3764_4_71 vegetarian > vegan 1.29119 0.00565
HRGMv2_3764_4_75 vegetarian > omnivore 1.00386 0.04057
HRGMv2_3764_4_76 vegetarian > omnivore 1.08980 0.04811
HRGMv2_3764_4_81 vegetarian > omnivore 1.15226 0.04811

🧭 Explore Read Mapping of CGC

← Back to Cluster List