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Cluster: HRGMv2_3738_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3738_7 HRGMv2_3738_7_54 69118 70272 + CE9
CAZyme HRGMv2_3738_7 HRGMv2_3738_7_55 70250 71422 + GH3
NULL(UNKNOWN) HRGMv2_3738_7 HRGMv2_3738_7_56 71572 71712 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3738_7 HRGMv2_3738_7_57 71794 72726 + Mem_trans
TC HRGMv2_3738_7 HRGMv2_3738_7_58 72829 74013 - 2.A.1.2.20
TC HRGMv2_3738_7 HRGMv2_3738_7_59 74253 75185 + 3.A.1.5.2
TC HRGMv2_3738_7 HRGMv2_3738_7_60 75186 76100 + 3.A.1.5.2
TC HRGMv2_3738_7 HRGMv2_3738_7_61 76100 77083 + 3.A.1.5.2
TC HRGMv2_3738_7 HRGMv2_3738_7_62 77083 78054 + 3.A.1.5.1
TC HRGMv2_3738_7 HRGMv2_3738_7_63 78051 79640 + 3.A.1.5.1
Gene ID: HRGMv2_3738_7_54
Type: CAZyme
Location: 69118 - 70272 (+)
Gene ID: HRGMv2_3738_7_55
Type: CAZyme
Location: 70250 - 71422 (+)
Gene ID: HRGMv2_3738_7_56
Type:
Location: 71572 - 71712 (+)
Gene ID: HRGMv2_3738_7_57
Type: pfam
Location: 71794 - 72726 (+)
Gene ID: HRGMv2_3738_7_58
Type: TC
Location: 72829 - 74013 (-)
Gene ID: HRGMv2_3738_7_59
Type: TC
Location: 74253 - 75185 (+)
Gene ID: HRGMv2_3738_7_60
Type: TC
Location: 75186 - 76100 (+)
Gene ID: HRGMv2_3738_7_61
Type: TC
Location: 76100 - 77083 (+)
Gene ID: HRGMv2_3738_7_62
Type: TC
Location: 77083 - 78054 (+)
Gene ID: HRGMv2_3738_7_63
Type: TC
Location: 78051 - 79640 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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