Cluster: HRGMv2_3738_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3738
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3738_3 | HRGMv2_3738_3_90 | 96939 | 98057 | - | GT28 |
| pfam | HRGMv2_3738_3 | HRGMv2_3738_3_91 | 98084 | 99451 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3738_3 | HRGMv2_3738_3_92 | 99487 | 100452 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3738_3_90
Type: CAZyme
Location: 96939 - 98057 (-)
Type: CAZyme
Location: 96939 - 98057 (-)
Gene ID: HRGMv2_3738_3_91
Type: pfam
Location: 98084 - 99451 (-)
Type: pfam
Location: 98084 - 99451 (-)
Gene ID: HRGMv2_3738_3_92
Type: TC
Location: 99487 - 100452 (-)
Type: TC
Location: 99487 - 100452 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp934193515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.