Cluster: HRGMv2_3738_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3738
- CGC Family ID: CGCFAM_00329
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3738_2 | HRGMv2_3738_2_142 | 150132 | 150911 | - | 2.A.102.3.2 |
| pfam | HRGMv2_3738_2 | HRGMv2_3738_2_143 | 150921 | 152288 | - | Polysacc_deac_2 |
| CAZyme | HRGMv2_3738_2 | HRGMv2_3738_2_144 | 152358 | 153518 | - | GT28 |
| pfam | HRGMv2_3738_2 | HRGMv2_3738_2_145 | 153632 | 153910 | - | Bac_DNA_binding | HU-HIG |
| pfam | HRGMv2_3738_2 | HRGMv2_3738_2_146 | 153953 | 154975 | - | MazG | MazG |
| TC | HRGMv2_3738_2 | HRGMv2_3738_2_147 | 154990 | 156543 | - | 2.A.66.2.14 |
Gene ID: HRGMv2_3738_2_142
Type: TC
Location: 150132 - 150911 (-)
Type: TC
Location: 150132 - 150911 (-)
Gene ID: HRGMv2_3738_2_143
Type: pfam
Location: 150921 - 152288 (-)
Type: pfam
Location: 150921 - 152288 (-)
Gene ID: HRGMv2_3738_2_144
Type: CAZyme
Location: 152358 - 153518 (-)
Type: CAZyme
Location: 152358 - 153518 (-)
Gene ID: HRGMv2_3738_2_145
Type: pfam
Location: 153632 - 153910 (-)
Type: pfam
Location: 153632 - 153910 (-)
Gene ID: HRGMv2_3738_2_146
Type: pfam
Location: 153953 - 154975 (-)
Type: pfam
Location: 153953 - 154975 (-)
Gene ID: HRGMv2_3738_2_147
Type: TC
Location: 154990 - 156543 (-)
Type: TC
Location: 154990 - 156543 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp934193515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.