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Cluster: HRGMv2_3738_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3738_31 HRGMv2_3738_31_8 4032 4727 - 2.A.109.1.5
pfam HRGMv2_3738_31 HRGMv2_3738_31_9 4942 6240 - Lar_N
TC HRGMv2_3738_31 HRGMv2_3738_31_10 6334 7158 - 3.A.1.24.5
CAZyme HRGMv2_3738_31 HRGMv2_3738_31_11 7507 8907 - AA4
NULL(UNKNOWN) HRGMv2_3738_31 HRGMv2_3738_31_12 8970 9401 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3738_31 HRGMv2_3738_31_13 9444 10790 - 2.A.1.3.10
peptidase HRGMv2_3738_31 HRGMv2_3738_31_14 11393 12556 + M20.UPD
TC HRGMv2_3738_31 HRGMv2_3738_31_15 12553 13575 + 3.A.1.24.2
TC HRGMv2_3738_31 HRGMv2_3738_31_16 13575 14237 + 3.A.1.24.5
Gene ID: HRGMv2_3738_31_8
Type: TC
Location: 4032 - 4727 (-)
Gene ID: HRGMv2_3738_31_9
Type: pfam
Location: 4942 - 6240 (-)
Gene ID: HRGMv2_3738_31_10
Type: TC
Location: 6334 - 7158 (-)
Gene ID: HRGMv2_3738_31_11
Type: CAZyme
Location: 7507 - 8907 (-)
Gene ID: HRGMv2_3738_31_12
Type:
Location: 8970 - 9401 (-)
Gene ID: HRGMv2_3738_31_13
Type: TC
Location: 9444 - 10790 (-)
Gene ID: HRGMv2_3738_31_14
Type: peptidase
Location: 11393 - 12556 (+)
Gene ID: HRGMv2_3738_31_15
Type: TC
Location: 12553 - 13575 (+)
Gene ID: HRGMv2_3738_31_16
Type: TC
Location: 13575 - 14237 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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