Cluster: HRGMv2_3738_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3738
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3738_28 | HRGMv2_3738_28_16 | 18901 | 21303 | - | 8.A.7.1.2 |
| CAZyme | HRGMv2_3738_28 | HRGMv2_3738_28_17 | 21675 | 23711 | + | GT51 |
| pfam | HRGMv2_3738_28 | HRGMv2_3738_28_18 | 24139 | 25635 | - | SSF |
| TC | HRGMv2_3738_28 | HRGMv2_3738_28_19 | 26011 | 27120 | - | 1.B.22.4.2 |
Gene ID: HRGMv2_3738_28_16
Type: TC
Location: 18901 - 21303 (-)
Type: TC
Location: 18901 - 21303 (-)
Gene ID: HRGMv2_3738_28_17
Type: CAZyme
Location: 21675 - 23711 (+)
Type: CAZyme
Location: 21675 - 23711 (+)
Gene ID: HRGMv2_3738_28_18
Type: pfam
Location: 24139 - 25635 (-)
Type: pfam
Location: 24139 - 25635 (-)
Gene ID: HRGMv2_3738_28_19
Type: TC
Location: 26011 - 27120 (-)
Type: TC
Location: 26011 - 27120 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp934193515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.