Cluster: HRGMv2_3738_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3738
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3738_17 | HRGMv2_3738_17_36 | 34201 | 34986 | - | CE4 |
| pfam | HRGMv2_3738_17 | HRGMv2_3738_17_37 | 35052 | 36020 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| pfam | HRGMv2_3738_17 | HRGMv2_3738_17_38 | 36417 | 37946 | - | BPD_transp_1 | BPD_transp_1 |
| TC | HRGMv2_3738_17 | HRGMv2_3738_17_39 | 37936 | 38691 | - | 3.A.1.9.2 |
Gene ID: HRGMv2_3738_17_36
Type: CAZyme
Location: 34201 - 34986 (-)
Type: CAZyme
Location: 34201 - 34986 (-)
Gene ID: HRGMv2_3738_17_37
Type: pfam
Location: 35052 - 36020 (-)
Type: pfam
Location: 35052 - 36020 (-)
Gene ID: HRGMv2_3738_17_38
Type: pfam
Location: 36417 - 37946 (-)
Type: pfam
Location: 36417 - 37946 (-)
Gene ID: HRGMv2_3738_17_39
Type: TC
Location: 37936 - 38691 (-)
Type: TC
Location: 37936 - 38691 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp934193515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.