Cluster: HRGMv2_3738_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3738
- CGC Family ID: CGCFAM_02598
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3738_16 | HRGMv2_3738_16_37 | 39279 | 40673 | + | 2.A.2.3.1 |
| TC | HRGMv2_3738_16 | HRGMv2_3738_16_38 | 40705 | 41304 | + | 2.A.115.2.14 |
| TF | HRGMv2_3738_16 | HRGMv2_3738_16_39 | 41396 | 42244 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3738_16 | HRGMv2_3738_16_40 | 42409 | 43434 | - | GH177 |
Gene ID: HRGMv2_3738_16_37
Type: TC
Location: 39279 - 40673 (+)
Type: TC
Location: 39279 - 40673 (+)
Gene ID: HRGMv2_3738_16_38
Type: TC
Location: 40705 - 41304 (+)
Type: TC
Location: 40705 - 41304 (+)
Gene ID: HRGMv2_3738_16_39
Type: TF
Location: 41396 - 42244 (-)
Type: TF
Location: 41396 - 42244 (-)
Gene ID: HRGMv2_3738_16_40
Type: CAZyme
Location: 42409 - 43434 (-)
Type: CAZyme
Location: 42409 - 43434 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp934193515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.