Cluster: HRGMv2_3738_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3738
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3738_1 | HRGMv2_3738_1_1 | 417 | 1526 | - | GT4 |
| CAZyme | HRGMv2_3738_1 | HRGMv2_3738_1_2 | 1585 | 2352 | - | GT2 |
| CAZyme | HRGMv2_3738_1 | HRGMv2_3738_1_3 | 2385 | 3251 | - | GT2 |
| TC | HRGMv2_3738_1 | HRGMv2_3738_1_4 | 3283 | 4644 | - | 9.B.18.1.3 |
| TC | HRGMv2_3738_1 | HRGMv2_3738_1_5 | 4667 | 5380 | - | 8.A.3.2.1 |
| TC | HRGMv2_3738_1 | HRGMv2_3738_1_6 | 5368 | 6822 | - | 8.A.3.3.1 |
Gene ID: HRGMv2_3738_1_1
Type: CAZyme
Location: 417 - 1526 (-)
Type: CAZyme
Location: 417 - 1526 (-)
Gene ID: HRGMv2_3738_1_2
Type: CAZyme
Location: 1585 - 2352 (-)
Type: CAZyme
Location: 1585 - 2352 (-)
Gene ID: HRGMv2_3738_1_3
Type: CAZyme
Location: 2385 - 3251 (-)
Type: CAZyme
Location: 2385 - 3251 (-)
Gene ID: HRGMv2_3738_1_4
Type: TC
Location: 3283 - 4644 (-)
Type: TC
Location: 3283 - 4644 (-)
Gene ID: HRGMv2_3738_1_5
Type: TC
Location: 4667 - 5380 (-)
Type: TC
Location: 4667 - 5380 (-)
Gene ID: HRGMv2_3738_1_6
Type: TC
Location: 5368 - 6822 (-)
Type: TC
Location: 5368 - 6822 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp934193515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.