Cluster: HRGMv2_3704_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3704_24 | HRGMv2_3704_24_178 | 202305 | 203579 | + | 2.A.103.1.3 |
| TC | HRGMv2_3704_24 | HRGMv2_3704_24_179 | 203642 | 204910 | + | 2.A.40.1.1 |
| pfam | HRGMv2_3704_24 | HRGMv2_3704_24_180 | 204969 | 206051 | + | Radical_SAM |
| pfam | HRGMv2_3704_24 | HRGMv2_3704_24_181 | 206366 | 207337 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| CAZyme | HRGMv2_3704_24 | HRGMv2_3704_24_182 | 207362 | 208171 | + | CE4 |
Gene ID: HRGMv2_3704_24_178
Type: TC
Location: 202305 - 203579 (+)
Type: TC
Location: 202305 - 203579 (+)
Gene ID: HRGMv2_3704_24_179
Type: TC
Location: 203642 - 204910 (+)
Type: TC
Location: 203642 - 204910 (+)
Gene ID: HRGMv2_3704_24_180
Type: pfam
Location: 204969 - 206051 (+)
Type: pfam
Location: 204969 - 206051 (+)
Gene ID: HRGMv2_3704_24_181
Type: pfam
Location: 206366 - 207337 (+)
Type: pfam
Location: 206366 - 207337 (+)
Gene ID: HRGMv2_3704_24_182
Type: CAZyme
Location: 207362 - 208171 (+)
Type: CAZyme
Location: 207362 - 208171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp002319965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.