Cluster: HRGMv2_3704_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3704_24 | HRGMv2_3704_24_29 | 33424 | 34581 | + | CE9 |
| pfam | HRGMv2_3704_24 | HRGMv2_3704_24_30 | 34654 | 35532 | - | ROK |
| pfam | HRGMv2_3704_24 | HRGMv2_3704_24_31 | 35658 | 37502 | + | Alk_phosphatase |
| TC | HRGMv2_3704_24 | HRGMv2_3704_24_32 | 37590 | 38426 | - | 3.A.1.132.3 |
Gene ID: HRGMv2_3704_24_29
Type: CAZyme
Location: 33424 - 34581 (+)
Type: CAZyme
Location: 33424 - 34581 (+)
Gene ID: HRGMv2_3704_24_30
Type: pfam
Location: 34654 - 35532 (-)
Type: pfam
Location: 34654 - 35532 (-)
Gene ID: HRGMv2_3704_24_31
Type: pfam
Location: 35658 - 37502 (+)
Type: pfam
Location: 35658 - 37502 (+)
Gene ID: HRGMv2_3704_24_32
Type: TC
Location: 37590 - 38426 (-)
Type: TC
Location: 37590 - 38426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp002319965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.