Cluster: HRGMv2_3704_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3704_6 | HRGMv2_3704_6_106 | 121018 | 122139 | - | GT28 |
| pfam | HRGMv2_3704_6 | HRGMv2_3704_6_107 | 122173 | 123540 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_3704_6 | HRGMv2_3704_6_108 | 123593 | 124558 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3704_6_106
Type: CAZyme
Location: 121018 - 122139 (-)
Type: CAZyme
Location: 121018 - 122139 (-)
Gene ID: HRGMv2_3704_6_107
Type: pfam
Location: 122173 - 123540 (-)
Type: pfam
Location: 122173 - 123540 (-)
Gene ID: HRGMv2_3704_6_108
Type: TC
Location: 123593 - 124558 (-)
Type: TC
Location: 123593 - 124558 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp002319965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.