Cluster: HRGMv2_3704_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3704_40 | HRGMv2_3704_40_3 | 3382 | 4929 | + | 2.A.14.1.3 |
| CAZyme | HRGMv2_3704_40 | HRGMv2_3704_40_4 | 5389 | 6810 | + | AA4 |
| pfam | HRGMv2_3704_40 | HRGMv2_3704_40_5 | 6918 | 8201 | + | Lar_N | LarA_C |
| TC | HRGMv2_3704_40 | HRGMv2_3704_40_6 | 8351 | 9049 | + | 2.A.109.1.5 |
Gene ID: HRGMv2_3704_40_3
Type: TC
Location: 3382 - 4929 (+)
Type: TC
Location: 3382 - 4929 (+)
Gene ID: HRGMv2_3704_40_4
Type: CAZyme
Location: 5389 - 6810 (+)
Type: CAZyme
Location: 5389 - 6810 (+)
Gene ID: HRGMv2_3704_40_5
Type: pfam
Location: 6918 - 8201 (+)
Type: pfam
Location: 6918 - 8201 (+)
Gene ID: HRGMv2_3704_40_6
Type: TC
Location: 8351 - 9049 (+)
Type: TC
Location: 8351 - 9049 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp002319965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.